Program: BLASTN   Use MegaBlast

Database BOxBLAST_db BOxBLAST_testdb

Enter sequence below in FASTA format

Or load it from disk

Set subsequence: From         To

Expect 0.0001 0.01 1 10 100 1000    Perform ungapped alignment

Word Size 11 12 16 20 24 28 32 48 64     Percent Identity    None 99 98 95 90 85 80 75 70 60

Discontiguous Word options   Template length Contiguous 16 18 21 Template type Coding Non-coding Two templates Require 2 word hits for extension

Other advanced options:     

Return alignment endpoints only